These Healthy Lemon Zucchini Muffins are bright, tender, lightly sweet, and afloat of caller flavor. Made with a hint of thyme, these muffins consciousness caller and a small peculiar portion inactive being wholesome capable for breakfast, brunch, oregon an day snack. These delicious small muffins are cleanable for outpouring brunch, lunchboxes, Mother’s Day, oregon summertime baking.

Why You’ll Love These Lemon Zucchini Muffins
These muffins are a large mode to usage up other zucchini portion creating thing fresh, flavorful, and kid-friendly. The citrus keeps them airy and bright, and the thyme adds a subtle herbal enactment that makes them sensation bakery-worthy.
You’ll emotion this look due to the fact that it is:
- Moist and tender
- Made with caller zucchini
- Bright with citrus flavor
- Lightly sweetened
- Perfect for breakfast, snacks, oregon brunch
- A large mode to sneak successful veggies
- Topped with an casual citrus glaze

Tips for the Best Lemon Zucchini Muffins:
Don’t Over-Squeeze the Zucchini
Zucchini adds moisture, which keeps these muffins brushed and tender. Lightly compression retired excess liquid, but don’t wring it wholly dry.
Use Fresh Lemon
Fresh citrus foodstuff and zest springiness the muffins their agleam citrus flavor. Bottled citrus foodstuff won’t sensation arsenic fresh.
Don’t Overmix
Stir the batter conscionable until combined. Overmixing tin marque muffins dense alternatively of brushed and fluffy.
Let Muffins Cool Before Glazing
If the muffins are excessively warm, the glaze volition melt close into them. For a beauteous drizzle, hold until they are mostly cooled.
Chop Thyme Finely
Fresh thyme adds a beauteous herbal note, but a small goes a agelong way. Finely chop it truthful the spirit is evenly distributed.

Easy Variations
Make Them Extra Lemon-y
Add much citrus zest to the batter oregon usage citrus extract for a stronger citrus flavor.
Add Blueberries
Fold successful ½ cupful caller oregon frozen blueberries for a citrus blueberry zucchini muffin.
Make Them Dairy-Free
Use dairy-free yogurt and plant-based milk.
Add Crunch
Sprinkle sliced almonds oregon coarse sweetener connected apical earlier baking.
Skip the Glaze
For a lower-sugar muffin, skip the glaze and service them plain oregon with a airy dispersed of butter.

What to Serve with Lemon Zucchini Muffins
These muffins are delicious with:
- Greek yogurt
- scrambled eggs
- fresh fruit
- smoothies
- tea oregon coffee
- brunch boards
They’re besides large for lunchboxes, after-school snacks, oregon make-ahead breakfasts.
Storage and Freezing
Store muffins successful an airtight instrumentality astatine country somesthesia for up to 2 days oregon successful the refrigerator for up to 5 days.
To freeze, skip the glaze and frost muffins successful a freezer-safe container for up to 3 months. Thaw astatine country temperature, past drizzle with glaze earlier serving if desired.

More of our Favorite Zucchini Muffins:
- Double Chocolate Zucchini Muffins
- Zucchini Fritters
- Baked Zucchini Casserole
- Chocolate Zucchini Sprinkle Bundt Cake
- Zucchini Alfredo
- The Best Zucchini Bread
- Crispy Baked Zucchini Chips
Healthy Zucchini Lemon Muffins
These Healthy Lemon Zucchini Muffins are bright, tender, lightly sweet, and afloat of caller flavor. Perfect for breakfast, brunch, oregon an day snack!
Prep Time15 minutes
Cook Time20 minutes
Total Time35 minutes
Servings: 12
- 1 cup shredded zucchini lightly squeezed of excess moisture
- 1 cup all-purpose flour
- 3/4 cup whole wheat flour oregon full wheat pastry flour or further all-purpose flour
- 1 tsp baking powder
- 1/2 tsp baking soda
- 1/2 tsp kosher salt
- 1 tbsp fresh citrus zest
- 1 tsp fresh thyme leaves finely chopped
- 2 large eggs
- 1/2 cup Greek yogurt
- 1/3 cup olive lipid oregon avocado oil
- 1/3 cup honey oregon maple syrup
- 1/4 cup milk
- 2 tbsp fresh citrus juice
- 1 tsp 1 spoon vanilla extract
- 2 tbsp coarse sugar optional, for topping
Preheat oven to 350°F. Line a 12-cup muffin tin with insubstantial liners oregon lightly grease with nonstick spray.
Shred zucchini utilizing a container grater. Lightly compression retired excess moisture with a cleanable room towel oregon insubstantial towels. You don’t request to region each the moisture—just capable truthful the muffins don’t go soggy.
In a ample bowl, whisk unneurotic flour, full wheat flour, baking powder, baking soda, salt, citrus zest, and caller thyme.
In a abstracted bowl, whisk unneurotic eggs, Greek yogurt, oil, chromatic oregon maple syrup, milk, citrus juice, and vanilla extract until smooth.
Pour the bedewed ingredients into the adust ingredients and mildly disturbance until conscionable combined. Fold successful the shredded zucchini. Be cautious not to overmix.
Divide the batter evenly among the muffin cups, filling each astir ¾ full. Sprinkle with coarse sweetener if desired.
Bake for 18–22 minutes, oregon until the tops outpouring backmost lightly and a toothpick inserted into the halfway comes retired clean. Let muffins chill successful the cookware for 5 minutes, past transportation to a ligament rack.
In a tiny bowl, whisk unneurotic powdered sugar, citrus juice, and citrus zest until smooth. Add much citrus foodstuff for a thinner glaze oregon much powdered sweetener for a thicker drizzle.
Drizzle glaze implicit cooled muffins and apical with other citrus zest. Let the glaze acceptable somewhat earlier serving.
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